✍️ Short Summary
This add‑on to your main guide fills common gaps teams hit when taking a KVM NVMe VPS from first boot to production: OS baseline, secrets management, TLS & security headers, reverse proxy best practices (Nginx/Caddy), observability, backups/DR, Cloudflare edge config, performance tuning, runbooks, and stack‑specific connection snippets (MongoDB included).
📎 Table of Contents
- 
OS & Security Baseline 
- 
Secrets & Configuration Management 
- 
Edge Gateways: Nginx vs Caddy 
- 
TLS & App Security Headers 
- 
Process Management Patterns 
- 
Logging & Observability 
- 
Backups & Disaster Recovery 
- 
Networking: Cloudflare, Real‑IP, WebSockets 
- 
Performance Tuning Cheatsheet 
- 
Compliance & Data Handling 
- 
Runbooks: On‑Call & Incident Basics 
- 
Templates & Snippets - 
Nginx SSR/WebSockets 
- 
Caddy reverse proxy 
- 
Cloudflare Real‑IP 
- 
systemd service template 
- 
.envexample
 
- 
- 
Stack DB Connect Quick‑Refs (MongoDB) 
- 
Conclusion / Next Steps 
1) 🔒 OS & Security Baseline
Goal: Hard, predictable foundation for all stacks.
Checklist
- 
Create non‑root sudo user; disable password SSH; use ed25519 keys 
- 
UFW allow 22,80,443. Deny others by default
- 
Fail2ban with jails for SSH, Nginx, and auth logs 
- 
Unattended‑upgrades for security patches 
- 
Time sync with chrony; set timezone; enable NTP
- 
Kernel/VM: disable Transparent Huge Pages (THP), set vm.swappiness=1
- 
FD limits: LimitNOFILE=64000via systemd drop‑in
- 
Swap: create (1–2× RAM) or confirm swap is adequate for crash tolerance 
- 
Filesystem: prefer ext4/xfs on NVMe; consider noatime/lazytimemounts
2) 🔑 Secrets & Configuration Management
Goal: Keep credentials safe, versionable, and environment‑specific.
- 
Store application config in .envwith 0600 permissions
- 
For production, reference env via systemd EnvironmentFile=
- 
Rotate secrets quarterly; maintain a secrets changelog 
- 
Optional: age/sopsfor encrypted config in Git
- 
Separate staging and production env files and buckets 
3) 🌐 Edge Gateways: Nginx vs Caddy
When to choose Nginx
- 
Familiarity, fine‑grained performance knobs, advanced caching 
When to choose Caddy
- 
Fastest path to automatic HTTPS, simple reverse proxy, clean config 
Rule of thumb: Use Caddy for 1–3 services and quick wins; use Nginx when you need granular control, complex caching, or legacy features.
4) 🔐 TLS & App Security Headers
Let’s Encrypt (either via Certbot with Nginx or Caddy’s auto‑TLS).
Minimum headers
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Strict-Transport-Security: max-age=31536000; includeSubDomains; preload
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Content-Security-Policy(start withdefault-src 'self'and expand)
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X-Frame-Options: SAMEORIGIN
- 
X-Content-Type-Options: nosniff
- 
Referrer-Policy: no-referrer-when-downgrade
- 
Permissions-Policyas needed
5) 🧩 Process Management Patterns
Pick one per service — don’t double‑wrap.
- 
Node.js: PM2 or systemd(not both). PM2 for clustering/zero‑downtime;systemdfor OS‑native control
- 
Python: Gunicorn/Uvicorn behind Nginx/Caddy, managed by systemd
- 
Rails: Puma + systemd; assets precompiled in CI/CD
- 
.NET: Kestrel + Nginx/Caddy; systemdservice
- 
Go/Rust: single binary + systemd; graceful shutdown; health endpoints
6) 📊 Logging & Observability
Target: See issues before users do.
- 
Structured JSON logs (app + proxy); centralize to Loki/ELK 
- 
Metrics: node_exporter, app exporters (e.g., MongoDB exporter), Prometheus + Grafana dashboards
- 
Uptime: Prometheus alerts + external pingers 
- 
Logrotate policies; compress & age out 
7) 💾 Backups & Disaster Recovery
- 
Filesystem snapshots (provider) + logical dumps (DB tools) 
- 
3‑2‑1 rule: 3 copies, 2 media, 1 offsite (S3/B2) 
- 
Restore tests monthly; document RTO/RPO targets 
- 
DB specifics (see templates): Postgres (pgBackRest), MySQL (Percona/XtraBackup or mysqldump), MongoDB (mongodump + snapshots) 
8) 🛰️ Networking: Cloudflare, Real‑IP, WebSockets
- 
Proxy orange‑cloud for DNS A/AAAA; set CF-Connecting-IPhandling
- 
Respect real‑client IP in app & logs (Nginx/Caddy snippets below) 
- 
WebSockets: ensure upgrade headers and keepalive tuning 
- 
Rate limits/WAF: start with sensible defaults; log violations 
9) 🚀 Performance Tuning Cheatsheet
- 
Keepalive: keepalive_timeout 15s; HTTP/2 enabled
- 
Compression: Brotli (prefer) with sane min sizes; fallback gzip 
- 
Static: long Cache-Control+ content hashing
- 
DB: create indexes early; monitor slow logs; pool sizes appropriate 
- 
Redis: persistent AOF + memory policy; separate from session cache for Woo/Magento 
- 
Queues: RabbitMQ/Redis with dead‑letter policies 
10) 🛡️ Compliance & Data Handling
- 
Data residency: pin region; document data flows 
- 
Encrypt PII at rest (DB or app‑level). Use KMS or sealed secrets 
- 
GDPR basics: retention schedules, right‑to‑erasure playbook 
11) 🧭 Runbooks: On‑Call & Incident Basics
- 
Who to page: roles & contact ladder 
- 
First 5 minutes: check health endpoints, error rates, DB connections, disk free, TLS expiry 
- 
Rollback: documented blue/green or tag‑based deployment rollback 
- 
Postmortem: template with action items & owners 
12) 🔧 Templates & Snippets
Nginx (SSR + WebSockets)
map $http_upgrade $connection_upgrade { default upgrade; '' close; }
server {
  listen 80; server_name example.com;
  location / {
    proxy_pass http://127.0.0.1:3000;
    proxy_set_header Host $host;
    proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
    proxy_set_header X-Forwarded-Proto $scheme;
    proxy_http_version 1.1;
    proxy_set_header Upgrade $http_upgrade;
    proxy_set_header Connection $connection_upgrade;
    proxy_read_timeout 60s;
  }
}
Caddy (auto‑TLS + reverse proxy)
example.com {
  encode zstd gzip
  reverse_proxy 127.0.0.1:3000
  header {
    Strict-Transport-Security "max-age=31536000; includeSubDomains; preload"
    X-Content-Type-Options "nosniff"
    Referrer-Policy "no-referrer-when-downgrade"
  }
}
Cloudflare Real‑IP (Nginx)
# Pull latest ranges from Cloudflare docs periodically
set_real_ip_from 173.245.48.0/20;
set_real_ip_from 103.21.244.0/22;
# ... (other ranges)
real_ip_header CF-Connecting-IP;
systemd service (template)
[Unit]
Description=App Service
After=network.target
[Service]
User=app
EnvironmentFile=/etc/app/app.env
WorkingDirectory=/var/www/app
ExecStart=/usr/bin/node server.js
Restart=always
RestartSec=3
LimitNOFILE=64000
[Install]
WantedBy=multi-user.target
.env (example)
PORT=3000
NODE_ENV=production
MONGODB_URI=mongodb://appuser:STRONGPASS@127.0.0.1:27017/appdb?authSource=appdb
REDIS_URL=redis://127.0.0.1:6379
SESSION_SECRET=replace_me
13) 🗄️ Stack DB Connect Quick‑Refs (MongoDB)
Node.js (Mongoose)
const mongoose = require('mongoose');
mongoose.connect(process.env.MONGODB_URI, {
  maxPoolSize: 10, serverSelectionTimeoutMS: 5000
});
FastAPI (Motor)
import motor.motor_asyncio as mtr
client = mtr.AsyncIOMotorClient(os.getenv("MONGODB_URI"), maxPoolSize=10)
db = client.appdb
Django (Mongo/Alt‑ORM)
DATABASES={
  'default':{
    'ENGINE':'djongo',
    'NAME':'appdb',
    'CLIENT':{'host':os.environ.get('MONGODB_URI')}
  }
}
Rails (Mongoid)
production:
  clients:
    default:
      uri: <%= ENV['MONGODB_URI'] %>
Security notes
- 
Auth enabled, local bind or IP allow‑list 
- 
UFW deny 27017 by default; allow only trusted IPs 
- 
Replica set for change streams/transactions when needed 
- 
Backups: daily mongodump+ provider snapshots; test restores
✅ Conclusion / Next Steps
- 
Apply the baseline & security hardening 
- 
Choose Nginx or Caddy per your complexity needs 
- 
Wire observability + backups from day one 
- 
Use the snippets to accelerate SSR, WebSockets, and Real‑IP correctness 
- 
Add the MongoDB pieces into each stack chapter 
🔗 Related Articles (suggested)
- 
Choosing Nginx vs Caddy for App Gateways (trade‑offs & configs) 
- 
Zero‑downtime Deployments (blue/green, canaries, rollbacks) 
- 
Prometheus, Grafana & Loki on a Single VPS (quick start) 
- 
Redis vs RabbitMQ for Queues (when to pick which) 
